BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032H03LP1|AL429640
(866 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1655 0.0
>3x_Contig1795
Length = 38452
Score = 1655 bits (830), Expect = 0.0
Identities = 853/866 (98%)
Strand = Plus / Plus
Query: 1 gatcnacaatttattccaatctaatgatgtttcctcgttctttgtggattcgatgatgct 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17861 gatcaacaatttattccaatctaatgatgtttcctcgttctttgtggattcgatgatgct 17920
Query: 61 cgaaaattctatcaattctttgaatgaccaattctggacagatatgttaacaaacttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17921 cgaaaattctatcaattctttgaatgaccaattctggacagatatgttaacaaacttact 17980
Query: 121 ataaacatagcacttgatctacagcctttataaacgaagggctcgtaatcttatcgcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17981 ataaacatagcacttgatctacagcctttataaacgaagggctcgtaatcttatcgcttt 18040
Query: 181 ccttagcattctcagattctctcaaatcaatcggttttagcatattgtgtaccacatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18041 ccttagcattctcagattctctcaaatcaatcggttttagcatattgtgtaccacatatt 18100
Query: 241 ttwagtataattcataaattttatccaatctttcgtgcaattcatggtgcgtcaaatcag 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18101 ttaagtataattcataaattttatccaatctttcgtgcaattcatggtgcgtcaaatcag 18160
Query: 301 aaaagataacaatccataggttagatgccgtgaatagtgcgtgtkttctatattttccgg 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 18161 aaaagataacaatccataggttagatgccgtgaatagtgcgtgtattctatattttccgg 18220
Query: 361 ttgttagtgttcgaagtgtgttacctggtgctatctttgtggacatcgcttttwatgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 18221 ttgttagtgttcgaagtgtgttacctggtgctatctttgtggacatcgcttttaatgagt 18280
Query: 421 gcaccataccatatatgagttttcctctggattgttgttctttagagtttacaatggatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18281 gcaccataccatatatgagttttcctctggattgttgttctttagagtttacaatggatg 18340
Query: 481 ttgactgatttactgtatactctttatcgaatatgcagttgccttaatgtagctcgaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18341 ttgactgatttactgtatactctttatcgaatatgcagttgccttaatgtagctcgaaag 18400
Query: 541 agataactgacgttagttctgggggttaagctttgtgaattccactagtcatggtggatt 600
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 18401 agataactgacgttagtactgggggttaagctttgtgaataccactagtcatggtggatt 18460
Query: 601 aattatwagattcacatacaatgcctgtcaaagatccaaagtgagtgtatcatgataaan 660
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 18461 aattataagattcacatacaatgcctgtcaaagatccaaagtgagtatatcatgataaaa 18520
Query: 661 atggcgtgcaatagtctgattccttacgaatggrtctaatttagtaaatgaatagtccaa 720
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 18521 atggcgtgcaatagtctgattccttacgaatggatctaatttagtaaatgaatagtccaa 18580
Query: 721 gggatgagcatacacttatgtdcgatagagtcttacttaaatgttgtwctaaaaccttcg 780
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 18581 gggatgagcatacacttatgtacgatagagtcttacttaaatgttgtactaaaaccttcg 18640
Query: 781 acggctttcgcatctaagttggcctttaacattcaggaaaagcctttgttggtcacgtga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18641 acggctttcgcatctaagttggcctttaacattcaggaaaagcctttgttggtcacgtga 18700
Query: 841 ttkattgaatcctcttaaaggttaaa 866
|| |||||||||||||||||||||||
Sbjct: 18701 ttgattgaatcctcttaaaggttaaa 18726
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5241
Number of Sequences: 1807
Number of extensions: 5241
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 866
length of database: 10,358,551
effective HSP length: 16
effective length of query: 850
effective length of database: 10,329,639
effective search space: 8780193150
effective search space used: 8780193150
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)